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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16455643_16462904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16455643 - 16462904

Intron Length:

7262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

CCAACTGTAAAG

Flanking Amino Acid:

LRRRKQGDKKTFDECVAAGG

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

82.6

0.73

0.9

80.2

37.3

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

-0.7

2.1

41.53

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014649

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015275

16451546 - 16524729

73184