Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_16725260_16726211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16725260 - 16726211

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GATGTTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTATCTATAATA

Flanking Amino Acid:

LKDVISRIENVCKRSVSEMT

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

84.6

0.86

41.2

Major PPT

71.4

0.48

65.9

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

67.4

0.54

1.5

77.12

33.5

Associated Gene:

Gene:

ODF2L

Ensembl Gene ID:

ENSAPLG00000004590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018298

16720487 - 16744386

23900

ENSAPLT00000004719

16720487 - 16744386

23900