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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16729616_16731075_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16729616 - 16731075

Intron Length:

1460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTATTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTCTCTTTATT

Flanking Amino Acid:

ELSSMLQFKKINVLKEDRMS

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

74.7

28.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.4

0.68

0.8

81.8

28.5

Minor 5ss

29.2

-2.4

3.1

34.7

35.4

Minor BPS

67.4

0.63

1.6

85.04

35.1

Associated Gene:

Gene:

ODF2L

Ensembl Gene ID:

ENSAPLG00000004590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028708

16728834 - 16761223

32390

ENSAPLT00000018298

16720487 - 16744386

23900

ENSAPLT00000004719

16720487 - 16744386

23900