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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16782457_16789063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16782457 - 16789063

Intron Length:

6607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGCGGG

5'SS Class:

major

3'SS Sequence:

CTTCCCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATTTTCTCACAT

Flanking Amino Acid:

RRGRISPAAPTKPFLLCIAI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.4

47.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

82.6

0.73

0.7

80.8

24.3

Minor 5ss

37.1

-1.5

3.3

45.7

43.2

Minor BPS

52.1

0.15

1.9

75.64

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041548

16782401 - 16831473

49073

ENSAPLT00000017322

16782401 - 16820341

37941