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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16789129_16793578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16789129 - 16793578

Intron Length:

4450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

AASVAQAPKQAVDVLHQLGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.5

28.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

28.3

-2.5

2.7

32.3

41.9

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041548

16782401 - 16831473

49073

ENSAPLT00000017322

16782401 - 16820341

37941