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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16802594_16805642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16802594 - 16805642

Intron Length:

3049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTT

Flanking Amino Acid:

PGPSGKRGPRGIPGPHGNPG

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.3

31.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.3

0.95

0.7

87.5

Minor 5ss

29.2

-2.4

2.5

36.8

Minor BPS

64.2

0.52

1.5

78.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041548

16782401 - 16831473

49073

ENSAPLT00000017322

16782401 - 16820341

37941