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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16809282_16810299_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16809282 - 16810299

Intron Length:

1018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATCT

5'SS Class:

major

3'SS Sequence:

TCTTCTTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TCTTCTTGTACA

Flanking Amino Acid:

SPGPAKRGEKGDPGPIGFQG

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

75.1

35.8

Major BPS

71.8

0.54

1.2

32.5

Major PPT

83.7

0.76

0.8

79.4

32.6

Minor 5ss

46.1

-0.4

2.9

66.5

44.4

Minor BPS

58.6

0.26

1.8

71.77

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041548

16782401 - 16831473

49073

ENSAPLT00000017322

16782401 - 16820341

37941