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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16816335_16818354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16816335 - 16818354

Intron Length:

2020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

GTTTCTGTATCT

Flanking Amino Acid:

LGLQGPRGDQGSPGLAGSTG

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

80.8

0.69

0.8

31.1

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

54.6

0.22

2.2

80.3

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041548

16782401 - 16831473

49073

ENSAPLT00000017322

16782401 - 16820341

37941