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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16818409_16819583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16818409 - 16819583

Intron Length:

1175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCAGTAA

5'SS Class:

major

3'SS Sequence:

TCTTTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TCTTTTTTAATA

Flanking Amino Acid:

TGAVGYPGRQGLAGPEGNPG

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

61.4

35.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

82.8

0.74

0.8

29.6

Minor 5ss

28.9

-2.4

3.4

37.2

47.4

Minor BPS

0.81

1.1

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041548

16782401 - 16831473

49073

ENSAPLT00000017322

16782401 - 16820341

37941