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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16913539_16916797_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16913539 - 16916797

Intron Length:

3259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATTCAAA

5'SS Class:

weak_major

3'SS Sequence:

GCTTTCCTAAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGCCAC

U12 Branch Point Sequence:

GCTTTCCTAAGA

Flanking Amino Acid:

RKEDCKIFPKILSASFRCET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.1

62.4

37.6

Major BPS

47.8

-0.1

1.3

56.1

40.7

Major PPT

52.9

0.07

1.7

62.1

38.7

Minor 5ss

46.6

-0.4

2.5

Minor BPS

50.5

0.01

64.11

42.3

Associated Gene:

Gene:

ZNHIT6

Ensembl Gene ID:

ENSAPLG00000003644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003727

16913422 - 16948615

35194