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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16943611_16948601_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16943611 - 16948601

Intron Length:

4991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TATGTAAATAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

AGGTATGTAAAT

Flanking Amino Acid:

LKNDMVVLGQEVGN*

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

87.1

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

55.9

0.13

1.2

54.5

43.1

Minor 5ss

-0.8

2.9

57.2

47.1

Minor BPS

44.4

-0.3

2.2

61.25

42.3

Associated Gene:

Gene:

ZNHIT6

Ensembl Gene ID:

ENSAPLG00000003644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003727

16913422 - 16948615

35194