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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16958285_16958393_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16958285 - 16958393

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TTCTCTTTACAG

Flanking Amino Acid:

CGQPSYASLKKGKKCTKTKK

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

70.1

0.5

70.3

31.9

Major PPT

88.8

0.87

0.7

83.3

25.1

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

56.8

0.07

1.8

63.96

44.2

Associated Gene:

Gene:

CCN1

Ensembl Gene ID:

ENSAPLG00000003558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022427

16957985 - 16959950

1966

ENSAPLT00000003638

16957985 - 16959950

1966