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Intron Name: Anas_platyrhynchos_platyrhynchos_8_16959082_16959419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16959082 - 16959419

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTGCTCTCTACA

Flanking Amino Acid:

SPVATKGICRAQSEGRPCEY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

82.5

0.73

0.8

76.7

32.1

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

49.3

-0

1.9

64.71

41.3

Associated Gene:

Gene:

CCN1

Ensembl Gene ID:

ENSAPLG00000003558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022427

16957985 - 16959950

1966

ENSAPLT00000003638

16957985 - 16959950

1966