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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17057076_17061307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17057076 - 17061307

Intron Length:

4232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TCGGCTGATACT

Flanking Amino Acid:

EDEMADVKKEALERMRPYLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

93.4

0.98

0.7

92.3

26.6

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

38.1

-0.8

2.4

54.44

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033040

17056385 - 17063051

6667