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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17061597_17062686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17061597 - 17062686

Intron Length:

1090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CATATTGTAATT

Flanking Amino Acid:

VKNEKLEALKGLSCSTCMTS

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

84.5

0.78

0.8

84.8

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

47.6

-0.1

64.56

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003579

17055655 - 17063051

7397

ENSAPLT00000033040

17056385 - 17063051

6667