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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17066141_17066228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17066141 - 17066228

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGGCG

5'SS Class:

major

3'SS Sequence:

TTTCTCTCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTGCAG

U12 Branch Point Sequence:

TCCCGCTGCAGC

Flanking Amino Acid:

ESRVLRAPEEPPREFKVWRN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

62.3

41.3

Major BPS

38.5

-0.7

1.7

47.8

Major PPT

85.2

0.79

0.7

24.1

Minor 5ss

28.5

-2.5

3.6

38.6

46.6

Minor BPS

36.9

-1

2.3

43.78

44.1

Associated Gene:

Gene:

C1orf52

Ensembl Gene ID:

ENSAPLG00000029539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027898

17065877 - 17068175

2299