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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17090280_17097210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17090280 - 17097210

Intron Length:

6931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTTTTCCTAAAG

Flanking Amino Acid:

DNPAFRCLSTGSGVILAHKA

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

74.5

0.61

79.6

29.1

Major PPT

81.7

0.71

0.9

83.3

25.8

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

62.3

0.25

1.8

73.24

38.9

Associated Gene:

Gene:

SYDE2

Ensembl Gene ID:

ENSAPLG00000003510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003577

17086742 - 17111978

25237