Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_17119121_17119596_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17119121 - 17119596

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGTTGG

5'SS Class:

major

3'SS Sequence:

AAATATCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTTTTGTTAAAT

Flanking Amino Acid:

ITCISPWIASSKQQFLAVSD

Intron Amino Acid Position:

811

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

64.4

42.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

71.9

0.49

67.1

43.5

Minor 5ss

48.1

-0.2

2.5

61.9

43.1

Minor BPS

65.6

0.57

2.1

88.72

36.1

Associated Gene:

Gene:

WDR63

Ensembl Gene ID:

ENSAPLG00000003460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003538

17117519 - 17141659

24141