Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_17124052_17125753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17124052 - 17125753

Intron Length:

1702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATATGCA

5'SS Class:

major

3'SS Sequence:

AGTCATTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TAATACTATACA

Flanking Amino Acid:

CVQLVTCSPDCLILFWDIRV

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

62.8

35.3

Major BPS

0.72

78.4

31.2

Major PPT

76.7

0.6

0.9

69.6

40.7

Minor 5ss

38.6

-1.3

3.1

46.9

43.8

Minor BPS

47.4

-0.2

2.1

62.5

43.2

Associated Gene:

Gene:

WDR63

Ensembl Gene ID:

ENSAPLG00000003460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003538

17117519 - 17141659

24141