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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17132306_17136531_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
17132306 - 17136531

Intron Length:
4226

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGGAAA

5'SS Class:
strong_major

3'SS Sequence:
CTTGATGTCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
TTATTTTTTACT

Flanking Amino Acid:
SEEAKENFLKPPDTAEEKEE

Intron Amino Acid Position:
148

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.6
0.98
0.8
84
28.8

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
71.1
0.48
1
64.1
41.3

Minor 5ss
31.6
-2.1
3.1
39
46.4

Minor BPS
67.9
0.64
1.6
84.01
36.6

Associated Gene:

Gene:
WDR63

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17117519 - 17141659
24141