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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17147142_17147221_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

17147142 - 17147221

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCTCAGT

5'SS Class:

weak_major

3'SS Sequence:

TTTGTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CCTTTTCCAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.4

56.6

47.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

84.9

0.79

0.8

82.2

34.1

Minor 5ss

35.5

-1.6

3.1

50.4

45.5

Minor BPS

48.6

-0

1.9

67.83

43.5

Associated Gene:

Gene:

MCOLN3

Ensembl Gene ID:

ENSAPLG00000003304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003369

17147089 - 17160532

13444