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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17147452_17149234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17147452 - 17149234

Intron Length:

1783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

AATGTCTTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TTGCCTTTAAAC

Flanking Amino Acid:

LLKIAMVTIQLVLFGLSNQM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.7

83.1

30.9

Major BPS

0.7

0.9

79.6

29.1

Major PPT

78.2

0.64

0.9

74.1

40.6

Minor 5ss

29.6

-2.3

2.6

32.5

42.4

Minor BPS

67.8

0.54

1.4

73.1

37.6

Associated Gene:

Gene:

MCOLN3

Ensembl Gene ID:

ENSAPLG00000003304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037400

17146794 - 17160532

13739

ENSAPLT00000003369

17147089 - 17160532

13444