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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17151417_17151496_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17151417 - 17151496

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

GACTCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAT

U12 Branch Point Sequence:

TTCCCCTGCAAA

Flanking Amino Acid:

HNLNFTLDFHRLVAVQLMFN

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

61.6

0.29

1.3

63.6

42.5

Major PPT

71.3

0.48

61.3

44.3

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

47.4

-0.2

63.18

42.6

Associated Gene:

Gene:

MCOLN3

Ensembl Gene ID:

ENSAPLG00000003304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037400

17146794 - 17160532

13739

ENSAPLT00000003369

17147089 - 17160532

13444