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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17152307_17154300_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17152307 - 17154300

Intron Length:

1994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TGATTATAAACA

Flanking Amino Acid:

ECKDWHVSGSIQKNTHYMMI

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

28.8

Major BPS

78.6

0.71

78.6

Major PPT

86.8

0.83

0.7

81.7

30.4

Minor 5ss

34.7

-1.7

3.2

43.7

38.1

Minor BPS

51.3

0.04

1.9

65.92

40.1

Associated Gene:

Gene:

MCOLN3

Ensembl Gene ID:

ENSAPLG00000003304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037400

17146794 - 17160532

13739

ENSAPLT00000003369

17147089 - 17160532

13444