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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17154636_17156578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17154636 - 17156578

Intron Length:

1943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTTTGTTGATG

Flanking Amino Acid:

STLKMEIQAKSLTSYDVCSI

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.8

22.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

39.6

-1.2

3.1

55.7

48.5

Minor BPS

56.2

0.05

2.1

69.4

38.8

Associated Gene:

Gene:

MCOLN3

Ensembl Gene ID:

ENSAPLG00000003304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037400

17146794 - 17160532

13739

ENSAPLT00000003369

17147089 - 17160532

13444