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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17156681_17156791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17156681 - 17156791

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGATC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GAATTCTTACTG

Flanking Amino Acid:

RYLGFFQKYNLLILTLRAAL

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

78.9

34.9

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

85.4

0.8

80.9

31.1

Minor 5ss

39.3

-1.2

3.3

56.6

41.1

Minor BPS

51.7

-0

1.7

53.68

41.4

Associated Gene:

Gene:

MCOLN3

Ensembl Gene ID:

ENSAPLG00000003304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037400

17146794 - 17160532

13739

ENSAPLT00000003369

17147089 - 17160532

13444