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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17158169_17160008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17158169 - 17160008

Intron Length:

1840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CTCTCCTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CTCTCCTGTATA

Flanking Amino Acid:

SSASLFCCCNSPRERI*

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.9

36.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

72.8

0.51

0.9

68.1

32.1

Minor 5ss

39.2

-1.2

2.7

37.4

Minor BPS

52.1

0.06

1.8

63.56

42.9

Associated Gene:

Gene:

MCOLN3

Ensembl Gene ID:

ENSAPLG00000003304

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003369

17147089 - 17160532

13444

ENSAPLT00000037400

17146794 - 17160532

13739