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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17170604_17171102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17170604 - 17171102

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTAGCATTACAT

Flanking Amino Acid:

TLNIDISTETECIVLKPQEL

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

71.8

34.3

Major BPS

73.9

0.59

30.2

Major PPT

0.88

0.6

84.1

23.9

Minor 5ss

43.1

-0.8

3.1

57.8

47.2

Minor BPS

48.4

-0

2.1

71.4

44.9

Associated Gene:

Gene:

MCOLN2

Ensembl Gene ID:

ENSAPLG00000003123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046640

17167883 - 17181360

13478

ENSAPLT00000003185

17167738 - 17181360

13623