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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17171423_17171863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17171423 - 17171863

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

TTTGTGTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGCTTCTGATAT

Flanking Amino Acid:

LPDCYAFQNTITFNNRAHSG

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.1

35.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

85.3

0.79

0.9

76.9

42.1

Minor 5ss

35.9

-1.6

3.3

53.4

43.8

Minor BPS

48.3

-0

1.8

66.53

43.8

Associated Gene:

Gene:

MCOLN2

Ensembl Gene ID:

ENSAPLG00000003123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046640

17167883 - 17181360

13478

ENSAPLT00000003185

17167738 - 17181360

13623