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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17171964_17173457_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17171964 - 17173457

Intron Length:

1494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGGCTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TGGCTTTTTACA

Flanking Amino Acid:

ECKDWHILGSVLQKNSQYIL

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

84.9

26.2

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

81.7

0.71

0.9

75.8

38.2

Minor 5ss

-1.8

2.8

39.2

40.5

Minor BPS

50.7

0.01

1.6

60.63

39.2

Associated Gene:

Gene:

MCOLN2

Ensembl Gene ID:

ENSAPLG00000003123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046640

17167883 - 17181360

13478

ENSAPLT00000003185

17167738 - 17181360

13623