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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17173574_17174970_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17173574 - 17174970

Intron Length:

1397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGTCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TGACCTGTAACT

Flanking Amino Acid:

SIVLALRLQKRFVNFFLEKY

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

74.4

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

66.6

0.37

62.3

38.7

Minor 5ss

41.4

-1

2.8

50.4

39.9

Minor BPS

55.6

0.25

75.14

41.3

Associated Gene:

Gene:

MCOLN2

Ensembl Gene ID:

ENSAPLG00000003123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046640

17167883 - 17181360

13478

ENSAPLT00000003185

17167738 - 17181360

13623