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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17175121_17176688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17175121 - 17176688

Intron Length:

1568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

GTAACCTGACCA

Flanking Amino Acid:

SILKMEIKAKNLTSYDVCSI

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

84.1

26.5

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

76.3

0.59

0.9

73.9

36.8

Minor 5ss

30.9

-2.2

3.5

46.6

48.7

Minor BPS

50.4

0.01

1.8

63.25

42.2

Associated Gene:

Gene:

MCOLN2

Ensembl Gene ID:

ENSAPLG00000003123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046640

17167883 - 17181360

13478

ENSAPLT00000003185

17167738 - 17181360

13623