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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17176791_17176898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17176791 - 17176898

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

ATGCTTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTCCTCCATG

Flanking Amino Acid:

RYLGYFQTYNVLILTMQASL

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

66.4

44.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.2

0.64

0.8

73.6

36.3

Minor 5ss

36.8

-1.5

3.5

52.1

44.8

Minor BPS

51.6

-0

2.1

63.16

45.2

Associated Gene:

Gene:

MCOLN2

Ensembl Gene ID:

ENSAPLG00000003123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046640

17167883 - 17181360

13478

ENSAPLT00000003185

17167738 - 17181360

13623