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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17177022_17178751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17177022 - 17178751

Intron Length:

1730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CATTATTTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TACTCATTATTT

Flanking Amino Acid:

WIVLGPYHEKFEDLNTVAEC

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

70.6

41.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.8

0.63

0.9

69.7

40.9

Minor 5ss

39.7

-1.2

2.8

47.2

Minor BPS

56.3

0.28

1.9

74.26

42.7

Associated Gene:

Gene:

MCOLN2

Ensembl Gene ID:

ENSAPLG00000003123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046640

17167883 - 17181360

13478

ENSAPLT00000003185

17167738 - 17181360

13623