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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17179611_17180898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17179611 - 17180898

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TAAACTTTTATT

Flanking Amino Acid:

ASMPSICCCRRRLSDDNLIL

Intron Amino Acid Position:

488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

1.1

76.5

38.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

32.4

-2

2.4

35.4

40.6

Minor BPS

55.2

0.24

1.6

70.58

40.6

Associated Gene:

Gene:

MCOLN2

Ensembl Gene ID:

ENSAPLG00000003123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046640

17167883 - 17181360

13478

ENSAPLT00000003185

17167738 - 17181360

13623