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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17232289_17234034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17232289 - 17234034

Intron Length:

1746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAAAC

5'SS Class:

major

3'SS Sequence:

TTCCTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGATACTGAACT

Flanking Amino Acid:

HLQNSYAKLKEQLELSKREI

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

68.4

36.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

86.4

0.82

0.7

80.4

31.6

Minor 5ss

31.7

-2.1

3.3

42.3

44.8

Minor BPS

64.6

0.54

1.7

80.42

40.3

Associated Gene:

Gene:

SSX2IP

Ensembl Gene ID:

ENSAPLG00000002969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003044

17228952 - 17245087

16136