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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17236339_17236423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17236339 - 17236423

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAACTTC

5'SS Class:

major

3'SS Sequence:

TTTCTGCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

GTTACTGTAAGA

Flanking Amino Acid:

GAWRTDKTEARNEEEMYKVL

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.6

34.8

Major BPS

71.4

0.53

1.2

63.4

Major PPT

81.4

0.71

0.8

73.8

36.9

Minor 5ss

42.3

-0.8

3.1

58.3

46.6

Minor BPS

47.6

-0.1

2.3

64.39

42.2

Associated Gene:

Gene:

SSX2IP

Ensembl Gene ID:

ENSAPLG00000002969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003044

17228952 - 17245087

16136