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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17243982_17244193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17243982 - 17244193

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTGAA

5'SS Class:

major

3'SS Sequence:

TCTTTTATACCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTACACTAACT

Flanking Amino Acid:

CQTSQYISRNSSNAASKKPA

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

70.3

35.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

80.5

0.69

0.9

74.9

38.6

Minor 5ss

43.6

-0.7

57.6

47.1

Minor BPS

62.3

0.46

87.41

37.2

Associated Gene:

Gene:

SSX2IP

Ensembl Gene ID:

ENSAPLG00000002969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003044

17228952 - 17245087

16136