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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17261286_17261336_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17261286 - 17261336

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCAAACTAG

5'SS Class:

major

3'SS Sequence:

GCAGTAGTGGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACACAA

U12 Branch Point Sequence:

CAAGCCGCAAGA

Flanking Amino Acid:

PMDEDDNDQVNGRNSKSSSS

Intron Amino Acid Position:

1155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.3

52.9

41.2

Major BPS

47.2

-0.1

1.1

52.9

34.1

Major PPT

49.6

-0

1.1

43.2

42.2

Minor 5ss

33.9

-1.8

4.1

43.9

Minor BPS

38.6

-0.8

2.3

45.15

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017155

17249442 - 17270914

21473