Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_17264342_17264432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17264342 - 17264432

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCACCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATGTGTTTAAAA

Flanking Amino Acid:

ASVLNAHKAVGYLKWGRNCQ

Intron Amino Acid Position:

1373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

69.6

41.1

Major BPS

73.1

0.58

79.6

29.1

Major PPT

71.7

0.49

0.8

27.8

Minor 5ss

35.5

-1.7

3.4

47.8

42.4

Minor BPS

55.6

0.17

1.9

66.61

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017155

17249442 - 17270914

21473

ENSAPLT00000020487

17249442 - 17270914

21473