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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17277951_17278175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17277951 - 17278175

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTTCTCTTGAAG

Flanking Amino Acid:

EPDGTAGMEARQALVLVDIK

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

77.9

0.63

79.2

26.8

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

62.5

0.25

1.5

68.98

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028497

17274793 - 17296360

21568