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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17283425_17283547_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17283425 - 17283547

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGATGCAG

5'SS Class:

weak_major

3'SS Sequence:

AGCAGTGGAAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCATCAA

U12 Branch Point Sequence:

CAGTGGTGAAAA

Flanking Amino Acid:

VLTRLLPFLFVQRGISGQWT

Intron Amino Acid Position:

766

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.1

44.1

38.7

Major BPS

66.5

0.41

1.1

68.2

37.5

Major PPT

39.9

-0.5

1.7

31.1

40.2

Minor 5ss

27.3

-2.6

3.2

35.4

42.3

Minor BPS

38.6

-0.8

2.4

46.32

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028497

17274793 - 17296360

21568