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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17287362_17288273_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17287362 - 17288273

Intron Length:

912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTTTTTGTA

5'SS Class:

weak_major

3'SS Sequence:

AAATTCTTGGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TAAGCCTAAATT

Flanking Amino Acid:

DWILYTSSSEYSKPPILAAI

Intron Amino Acid Position:

1195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.8

0.11

1.3

61.1

37.2

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

-0.1

1.8

54.9

44.7

Minor 5ss

41.2

-1

3.1

54.7

42.8

Minor BPS

59.2

0.37

1.8

73.78

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028497

17274793 - 17296360

21568