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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17288705_17290135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17288705 - 17290135

Intron Length:

1431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGATTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGGTTTTAATC

Flanking Amino Acid:

VPSSVRRTARWFYRYLPGAA

Intron Amino Acid Position:

1308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.6

29.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.9

0.9

0.7

29.4

Minor 5ss

36.2

-1.6

3.2

44.1

44.7

Minor BPS

59.9

0.29

1.3

63.28

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028497

17274793 - 17296360

21568