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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17295604_17296241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17295604 - 17296241

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTTACA

Flanking Amino Acid:

ISVGFHCVPADSTLNPEEEQ

Intron Amino Acid Position:

1633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

75.8

35.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.81

0.7

80.2

30.7

Minor 5ss

32.5

-2

Minor BPS

62.6

0.39

1.9

76.8

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028497

17274793 - 17296360

21568