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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17298550_17299358_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17298550 - 17299358

Intron Length:

809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

ATGATACTAACA

Flanking Amino Acid:

AFHREIPGSQVTFDVAWSPA

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

76.8

0.67

0.9

75.9

Major PPT

81.5

0.71

0.9

81.7

35.4

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

-0.2

1.9

60.38

Associated Gene:

Gene:

CTBS

Ensembl Gene ID:

ENSAPLG00000016415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025157

17297852 - 17303545

5694

ENSAPLT00000017131

17296242 - 17303545

7304