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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17305266_17306876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17305266 - 17306876

Intron Length:

1611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TAATGCTCAACT

Flanking Amino Acid:

KQLNSKTNLKNNKIIQVTRV

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.6

31.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.72

0.9

77.3

36.1

Minor 5ss

43.1

-0.8

2.4

55.1

42.2

Minor BPS

59.8

0.39

78.78

42.8

Associated Gene:

Gene:

SPATA1

Ensembl Gene ID:

ENSAPLG00000016401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040212

17302090 - 17321490

19401

ENSAPLT00000017117

17298374 - 17321490

23117