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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17307047_17308749_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17307047 - 17308749

Intron Length:

1703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACATTTT

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

TGAGACCAAACT

Flanking Amino Acid:

LEQNKLRRYHVREEWKKKYF

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

74.1

37.1

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

88.9

0.87

0.6

85.2

22.1

Minor 5ss

44.6

-0.6

3.2

63.7

Minor BPS

43.7

-0.4

2.2

63.53

45.8

Associated Gene:

Gene:

SPATA1

Ensembl Gene ID:

ENSAPLG00000016401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040212

17302090 - 17321490

19401

ENSAPLT00000017117

17298374 - 17321490

23117