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Intron Name: Anas_platyrhynchos_platyrhynchos_8_17309853_17310781_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17309853 - 17310781

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGACCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TGTCTTTTGACC

Flanking Amino Acid:

TGPGEKLDNQVDENKQNNST

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

78.6

0.71

78.6

Major PPT

72.9

0.52

0.9

63.6

39.1

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

65.3

0.46

1.2

71.36

33.5

Associated Gene:

Gene:

SPATA1

Ensembl Gene ID:

ENSAPLG00000016401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017117

17298374 - 17321490

23117

ENSAPLT00000040212

17302090 - 17321490

19401