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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1730994_1732829_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1730994 - 1732829

Intron Length:

1836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAG

U12 Branch Point Sequence:

TCTGTGTGTACG

Flanking Amino Acid:

AEFSTPFVNQRWFFEVLGYP

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

73.1

43.9

Major BPS

63.3

0.33

1.6

73.3

39.1

Major PPT

85.5

0.8

80.1

31.8

Minor 5ss

41.6

-0.9

58.6

45.7

Minor BPS

39.1

-1

2.4

46.97

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011763

1717846 - 1733145

15300